Flexidot accepts one or more uncompressed fasta files as input. The files can contain multiple sequences. For pairwise dotplots, the collage output is recommended for larger numbers of sequences. The ...

In this paper, we propose a compression modeling approach for the multiple sequence alignment (MSA) blocks, which make up most of these datasets. Our method is based on a mixture of finite-context ...

This scientific area requires powerful computing resources for exploring large sets of biological data. Multiple sequence alignment is an important method in the DNA and protein analysis. ClustalW has ...

Another Python plotting library, really?? There is no shortage of quality plotting libraries in Python. Basic plots with default styling are often easy, but acheiving complex figures with subplots, ...