Alignment and sequencing errors are a major concern in molecular evolution, and this valuable study represents a welcome improvement for genome-wide scans of positive selection. This new method seems ...

Its alignment-free nature makes it much faster than traditional approaches, and the newly found remote homologs benefit our understanding of protein evolution, structure and function. News & Views ...

Its alignment-free nature makes it much faster than traditional approaches, and the newly found remote homologs benefit our understanding of protein evolution, structure and function. News & Views ...

NVIDIA's collaboration with MMseqs2 enhances protein sequence alignment using GPU acceleration, promising significant advancements in AI-driven drug discovery and protein design. In a groundbreaking ...

To bridge this gap, we introduce ProLLaMA, a multitask protein language model enhanced by the Evolutionary Protein Generation Framework (EPGF). We construct** a comprehensive instruction dataset ...

Alignment python package. Not general but should allow some generalization with not too much effort. - apy-github/align ...

Self-assembled peptides are promising templates for the design of inhibitors of protein–protein interactions (PPIs) because they can be endowed with affinity- and selectivity-defining amino acids ...