They develop these tools using Perl, PHP, MySQL, and other computer languages. Bioinformatics scientists also use standard tools such as Basic Local Alignment Search Tool (BLAST) and other sequence ...

1, we present a chronological account of the rise of bioinformatics. At about the same time that BLAST was developed ... paved the way for developing graph algorithms, such as those for detecting ...

Through collaboration with colleagues in areas such as Computer Science, Biology, Oceanography and Statistics, researchers in the Algorithms and Bioinformatics cluster develop tools that have gained ...

Although our compressive BLAST algorithm achieves over 99% sensitivity without substantial slowdown (Fig. 3 and Supplementary Figs. 6,7), improvements in sensitivity necessarily involve losses in ...

Bioinformatics-based methods are more recent attractive alternatives that have demonstrated equal or better precision compared with rules-based algorithms. This review aims to discuss the ...

On Tuesday the 3rd of October 2023, M.Sc. Manuel Cáceres defends his PhD thesis on Parameterized and Safe & Complete Graph Algorithms for Bioinformatics. The thesis is related to research done in the ...

Our research is focused on graph algorithms, from both a theoretical perspective, and a practical perspective motivated by real-world problems in Bioinformatics, such as genome sequencing technologies ...